Package: FielDHub 1.4.2

FielDHub: A Shiny App for Design of Experiments in Life Sciences

A shiny design of experiments (DOE) app that aids in the creation of traditional, un-replicated, augmented and partially-replicated designs applied to agriculture, plant breeding, forestry, animal and biological sciences.

Authors:Didier Murillo [cre, aut], Salvador Gezan [aut], Ana Heilman [ctb], Thomas Walk [ctb], Johan Aparicio [ctb], Matthew Seefeldt [ctb], Jean-Marc Montpetit [ctb], Richard Horsley [ctb], North Dakota State University [cph]

FielDHub_1.4.2.tar.gz
FielDHub_1.4.2.zip(r-4.5)FielDHub_1.4.2.zip(r-4.4)FielDHub_1.4.2.zip(r-4.3)
FielDHub_1.4.2.tgz(r-4.4-any)FielDHub_1.4.2.tgz(r-4.3-any)
FielDHub_1.4.2.tar.gz(r-4.5-noble)FielDHub_1.4.2.tar.gz(r-4.4-noble)
FielDHub_1.4.2.tgz(r-4.4-emscripten)FielDHub_1.4.2.tgz(r-4.3-emscripten)
FielDHub.pdf |FielDHub.html
FielDHub/json (API)
NEWS

# Install 'FielDHub' in R:
install.packages('FielDHub', repos = c('https://didiermurillof.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/didiermurillof/fieldhub/issues

On CRAN:

agriculturalbreedingdesigndoeexperimentalplantbreedingshiny

22 exports 39 stars 3.26 score 95 dependencies 1 dependents 70 scripts 1.1k downloads

Last updated 2 months agofrom:a6114452c2. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 25 2024
R-4.5-winOKAug 25 2024
R-4.5-linuxOKAug 25 2024
R-4.4-winOKAug 25 2024
R-4.4-macOKAug 25 2024
R-4.3-winOKAug 25 2024
R-4.3-macOKAug 25 2024

Exports:alpha_latticeCRDdiagonal_arrangementdo_optimfull_factorialincomplete_blockslatin_squaremulti_location_prepoptimized_arrangementpartially_replicatedRCBDRCBD_augmentedrectangular_latticerow_columnrun_appsparse_allocationsplit_familiessplit_plotsplit_split_plotsquare_latticestrip_plotswap_pairs

Dependencies:askpassattemptbase64encblocksdesignbslibcachemclicolorspacecommonmarkconfigcpp11crayoncrosstalkcurldata.tabledesplotdigestdplyrDTevaluatefansifarverfastmapfontawesomefsgenericsggplot2gluegolemgridExtragtableherehighrhtmltoolshtmlwidgetshttpuvhttrisobandjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnlmenumbersopensslpillarpkgconfigplotlyplyrPolynomFpromisespurrrR6rappdirsRColorBrewerRcppreshape2rlangrmarkdownrprojrootsassscalesshinyshinyalertshinycssloadersshinyjsshinythemessourcetoolsstringistringrsystibbletidyrtidyselecttinytexutf8uuidvctrsviridisviridisLitewithrxfunxtableyaml

Alpha Lattice Design

Rendered fromalpha_lattice.Rmdusingknitr::rmarkdownon Aug 25 2024.

Last update: 2023-04-24
Started: 2022-07-28

Augmented Randomized Complete Block Design

Rendered fromRCBD_augmented.Rmdusingknitr::rmarkdownon Aug 25 2024.

Last update: 2023-04-24
Started: 2022-07-28

Full Factorial Design

Rendered fromfull_factorial.Rmdusingknitr::rmarkdownon Aug 25 2024.

Last update: 2023-04-24
Started: 2022-07-28

Optimized Multi-Location P-rep Design

Rendered frommulti_location_prep.Rmdusingknitr::rmarkdownon Aug 25 2024.

Last update: 2024-03-27
Started: 2023-03-28

Partially Replicated (p-rep) Design

Rendered frompartially_replicated.Rmdusingknitr::rmarkdownon Aug 25 2024.

Last update: 2023-10-27
Started: 2022-07-28

Randomized Complete Block Design

Rendered fromrcbd.Rmdusingknitr::rmarkdownon Aug 25 2024.

Last update: 2023-04-24
Started: 2022-07-28

Row-Column Design

Rendered fromrow_column.Rmdusingknitr::rmarkdownon Aug 25 2024.

Last update: 2024-07-26
Started: 2022-07-28

Split-Plot Design

Rendered fromsplit_plot.Rmdusingknitr::rmarkdownon Aug 25 2024.

Last update: 2023-04-24
Started: 2022-07-28

Unreplicated Diagonal Arrangement Design

Rendered fromdiagonal_arrangement.Rmdusingknitr::rmarkdownon Aug 25 2024.

Last update: 2023-04-24
Started: 2022-07-28

Readme and manuals

Help Manual

Help pageTopics
Generates an Alpha Designalpha_lattice
Generates a Completely Randomized Design (CRD)CRD
Spatial Un-replicated Diagonal Arrangement Designdiagonal_arrangement
Generate the sparse or p-rep allocation to multiple locations.do_optim
Generates a Full Factorial Designfull_factorial
Generates a Resolvable Incomplete Block Designincomplete_blocks
Generates a Latin Square Designlatin_square
Optimized multi-location partially replicated designmulti_location_prep
Generates an Spatial Un-replicated Optimized Arrangement Designoptimized_arrangement
Generates a Spatial Partially Replicated Arrangement Designpartially_replicated
Plot a 'FielDHub' objectplot.FielDHub
Print a 'FielDHub' objectprint.FielDHub
Print a 'fieldLayout' plot objectprint.fieldLayout
Print the summary of a 'FielDHub' objectprint.summary.FielDHub
Generates a Randomized Complete Block Design (RCBD)RCBD
Generates an Augmented Randomized Complete Block Design (ARCBD)RCBD_augmented
Generates a Rectangular Lattice Design.rectangular_lattice
Generates a Resolvable Row-Column Design (RowColD)row_column
Run the Shiny Applicationrun_app
Unreplicated designs using the sparse allocation approachsparse_allocation
Split a population of genotypes randomly into several locations.split_families
Generates a Split Plot Designsplit_plot
Generates a Split Split Plot Designsplit_split_plot
Generates a Square Lattice Design.square_lattice
Strip Plot Designstrip_plot
Summary a 'FielDHub' objectsummary.FielDHub
Swap pairs in a matrix of integersswap_pairs